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Access to raw or normalized expression values Sample annotations provided To ensure standardization in the processing pipeline, studies were processed from raw data whenever available and from pre-processed data otherwise.
Synchronization in the processing pipeline is handled through handshakes between the system blocks.
Figure 2 gives a schematic describing the steps in the processing pipeline leading to predictions of co-fluctuating residue groups.
The first step in the processing pipeline is to automatically select a subset of representative viruses.
14 The initial step in the processing pipeline was a visual inspection of the EEG recordings by an experienced neurologist.
Because we included an abbreviation tagger in the processing pipeline (Fig. 3), they are automatically expanded, if possible.
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We plan to work on such extension of the aroma.affymetrix package including the VN into the processing pipeline in a near future.
The authors proposed that the high levels of automation in the processing pipelines should further increase the integrity of the datasets being generated [ 25].
In the left panel, the processing pipeline selection menu is located (first button in the left panel), as well as buttons for starting a pipeline, adding pipeline 'jobs' to a queue, and starting the latter.
GASS produces the genome annotations with the processing pipeline shown in Figure 1.
(9) AR (p i ) = length (p i ) width (p i ) The system is composed of the 11 main modules listed in Table 2. Figure 7 illustrates the processing pipeline interaction between the different modules and the user interface.
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