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Figure 5 The forward currents and reverse currents in the matched column (a) and unmatched column (b).
Of course, considering the subdominant amino acids require more entries in the match column.
The same calculation as above tells us that we need only eight or more amino acids in the match column to indicate a preference for leucine.
If an entry's domain architecture could be determined by a model, it indicated that the entry could be predicted by the model and it would be counted in the "Match" column.
When the best matching column in Φ is found in step 2 of SOMP, Φ k T R i - 1 indicates the value of ∥X k ∥, where ∥X k ∥ is the k-th row in X.
In Fig. 1b, the best matched column with the input vector of 'HHLL' is the fourth column with 'LRS-LRS-HRS-HRS'.
Each of the fourteen predictions corresponds to a validated fusion ("Matching" column in Additional file 1: Table S14), with 14 Barnacle predictions representing 11 validated fusion gene pairs ("Recovered" column in Additional file 1: Table S14, Additional file 1: Table S15).
Furthermore, the dominant amino acid in a match column often has very different observed and background frequencies.
For co-registration of ROIs in the neck (e.g. lymph nodes or hypopharyngeal tumours), only the neck and vertebral column was used in the matching procedure.
They correlate new data with the old, using big data techniques to fill in the columns, matching up data stolen from different sources to form a more-complete picture.
The second column measures the randomness of the interactions in the matching clusters of the WC method.
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