Sentence examples for in the impute from inspiring English sources

Genes with missing values in >10% of samples were excluded; otherwise missing values were imputed using k-nearest neighbors implemented in the impute R package.

For the remaining missing values in X ī, values were imputed using the k- nearest neighbors algorithm, using k = 20, as implemented in the impute.knn function in the 'impute' R package (Troyanskaya et al., 2001 ).

For the Sorlie et al dataset, individuals whose cause of death was not breast cancer were excluded from the analysis and missing data due to quality control issues were filled using the knn method in the "impute" package in Bioconductor [ 34].

One disadvantage of a multi-stage approach — for example, first fitting splines to the data for sampled profiles, then imputing new data for the target interval, before considering a spatial analysis with the imputed data — is that the imputation generally ignores any uncertainty in the imputed data, which might give misleading conclusions.

The batch effect filter eliminated SNPs for which the imputation batch explained >0.1% of variance in the imputed dosage.

One of its main advantages is that it produces reliable estimates of standard errors, and through the introduction of random error into the imputation process, it considerably reduces potential biases in the imputed data [ 63].

However, comparing the 50 diploid PD and 50 diploid ADCL panels, the percentage of imputed sites that are polymorphic in the imputed data sets showed no significant difference (P = 0.1625).

Likewise, the results did not differ in the imputed datasets.

No anomalies were found in the imputed data.

In the paper we present the results of the analyses in the imputed data.

Characteristics were generally similar in the imputed data compared with the observed data.