Sentence examples for in the final alignment from inspiring English sources

Assuming that the MEM is included in the final alignment, our aligner estimates the mapping region range [ T a, T b] as: (4) Our aligner computes the optimal local alignment scores in all determined mapping regions of S using the SW algorithm, and then builds a sorted list of all mapping regions in the descending order of score.

Unambiguously aligned 312 aa positions were retained in the final alignment.

MP-Align takes the entire network topology into account in the final alignment, thereby identifying the largest connected subpathway.

To determine the coverage thresholds, we summed up the coverage reported by BamTools63 for each position in the final alignment files across all genotypes.

In the above example, points from the main single wall weakly constrain translations and generate sliding effects in the final alignment, as already discussed in [6, 35 37].

By tracking the marker projections throughout a series of micrographs, the specimen deformation can be closely monitored and accounted for in the final alignment.

In the final alignments spanning a total of 2626 bp, we observed 65 segregating sites, corresponding to 1 SNP per ∼40 bp, which is in concordance with previously published levels of exonic polymorphism in the genus [16].

In the final alignments, 18 sites of 12S and 54 sites of 16S were excluded due to ambiguous positional homology.

All single and double indels present in cichlid sequences in the final alignments (36 and 5, respectively) were considered as sequencing errors and replaced with Ns.

Gaps shared between species were included in the final alignments, whereas gaps that occur only in a single sequence were removed.

The algorithm performs ungapped extension of the alignments as it is sufficient for the compartmentization and gaps in the final alignments are discovered using the target function of the refinement stage.