In addition, gene duplication analysis identified lineage-specific expanded families with functional annotations associated with proteolysis, zinc ion binding, chitin binding, sensory perception, ethanol tolerance, immunity, physiology, and reproduction.
The gene duplication analysis showed that 58.5% and 6.3% of SlbHLH genes belonged to low-stringency and high-stringency duplication, respectively, indicating that the SlbHLH genes are mainly generated via short low-stringency region duplication in tomato.
The term 'syntenic region' is widely used in the context of gene duplication analysis and evolutionary history of genes and genomes.
In addition, a gene duplication analysis revealed that the class I cytosolic sHsp subfamily had expanded more than that of Arabidopsis, showing both the conservation and divergence of gene families during the evolution.
Finally, chromosomes 4 and 6 contain three putative duplications, one presenting 82% similarity, involving two of the four genes classified in subfamily P. The duplication prediction analysis indicated that the evolution of the Hsp20 gene family in the soybean genome resulted from a total of 23 gene duplications, five of which were segmental among four chromosomes.
Detailed examination and comparative analysis of the nature and impact of duplications in the zebrafish genome may only provide some reference for gene duplication analysis in related species.
Segmental duplication analysis identified four OsBgals located on the duplicated segmental regions in rice chromosomes.
Microbial tests such as fecal coliforms (FC) and parasite egg (Ascaris) were carried out during start, processing and curing time with duplication analysis in 56 days.
Additional file 4: Segmental duplication analysis for SlbHLH genes in whole tomato genome.
Gene duplication analysis reveals that whole genome and chromosomal segment duplications mainly contributed to the expansion of both OsPP2Cs and AtPP2Cs, but tandem or local duplication occurred less frequently in Arabidopsis than rice.
