Thanks to these repositories, gene expression (transcriptomics), protein expression and modifications (proteomics), primary and secondary metabolites production (metabolomics) as well as their control systems can be framed in the context of flux analysis, reconstructing pathways and modelling their behaviour in a mechanistic and mathematically appropriate framework [ 10].
Singh et al. (2011) uses the terminology of flows for RNA-Seq data in the context of testing differential transcription without reconstructing transcripts.
Possibly, such logically loose principles would be obfuscatory in the context of a metaphysical attempt to reconstruct the truth-conditions of moral statements.
To address this question the native spliceosomes were analyzed and reconstructed in the context of the intact particle, using electron microscopy combined with image processing.
The phylogenetic history of C. coli was reconstructed, in the context of other species within the genus Campylobacter, for which similar MLST schemes have been developed [12], [14], [70].
Smell, as a potential factor in social life, can be reconstructed indirectly in the context of various human activities.
The phylogeny of catalase peroxidases (KatGs) was reconstructed recently in the context of the evolution of the whole Class I of the peroxidase catalase superfamily that also contains homologous cytochrome c peroxidases, ascorbate peroxidases and hybrid-type peroxidases [24].
Recently, haplotype sharing distributions were studied in the context of demographic inference, and they were used to reconstruct recent demographic events in several populations.
In the context of the simulated dataset used here, we expect that the reconstructed gene trees will become more similar to the species tree than the true trees used to simulate alignments.
We do this in the context of a far-field imaging simulation in which we wish to reconstruct a Q-pixel high-resolution image x of a large scene.
