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In terms of sequence conservation, PGx variants are more conserved than neutral variants and much less conserved than disease variants.
In terms of sequence conservation, eoslipin sequences most resemble slipin subfamilies and share at least three conserved motifs (red line in Figure 6) to the exclusion of alloslipins.
These were analyzed in terms of sequence conservation, structural conservation and stability, location in secondary structure, and phylogenetic conservation.
These proteins showed differences in terms of sequence conservation and number of interacting partners.
The evolution of neuropterid tRNAs seems to have been variable both in terms of sequence conservation and nucleotide substitution processes.
What are the specific evolutionary trends (both in terms of sequence conservation and expression conservation) for these sequences Brassicaceae genomes?
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They are often relatively well conserved within the clusters in terms of sequence and, in case of Arabidopsis, even conservation of expression patterns has been observed.
The number and type of aligned residues were used to classify the binding site local conservation, both in terms of sequence coverage (percentage of binding site residues in the original target that could be aligned to the pathogen sequence) and identity (percentage of identical residues among the aligned binding site residues).
A second class of general methods use gene order conservation to disambiguate the orthology relationships for genes that do not have a clear 'best hit' in another genome, in terms of sequence similarity [ 51 55].
We characterize each fragment in terms of its sequence conservation, structural similarity and functional descriptions.
The frequency of coupling with neighbouring and distant residues was calculated and compared in terms of the sequence conservation that best describes the LM evolution, that is to say the variable that gives the lowest correlation in Table 2.
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