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After photopatterning, the fsPAG was soaked in run buffer for 10 min on an Orbitron shaker.
PCR product was hybridized to fresh Firefly Multimix for 30 minutes at 37°C and re-suspended in Run Buffer for readout.
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The column was equilibrated in running buffer (2 × PBS (phosphate-buffered saline)) and calibrated with different standard proteins: Tyroglobulin (660 kDa), Ferritin (440 kDa), Catalase (240 kDa), and BSA (bovine serum albumin) (67 kDa).
Low melting point agarose (0.5% in running buffer containing BPB) was layered on top of the strip.
A Superdex 200 column was equilibrated in running buffer and 200 μl of the sample was run through the column at a rate of 0.5 ml min−1.
A Superdex 75 column was equilibrated in running buffer and 100 μl samples were run through the column at a rate of 0.5 ml min−1.
Purified fusion protein was diluted to 2 mg ml−1 in running buffer (20 mM Tris, 150 mM NaCl, 1 mM EDTA, pH 8).
Different concentrations of peptides (33 nM–2.7 μM in running buffer) were applied to the chip surface at a flow rate of 10 μl min−1.
In the enhanced format the assay had limits of detection (LOD) of 3.7 pg ml−1 with standard in running buffer, and 15.4 pg ml−1 in a stripped human saliva matrix.
Cell lysates were heated to 95 100 °C for 5 min in sample buffer (187.5 mM Tris-HCl, 6% w/v SDS, 30% glycerol, 150 mM DTT, 0.03% w/v bromphenol blue), and an equal amount of protein was loaded on precast SDS-PAGE (Thermo Fisher Scientific) in running buffer and transferred to nitrocellulose membrane.
Twenty-four hours after transfection, the cell lysate was fractionated by 8% Native Gel in running buffer containing 1% sodium deoxycholate at 4°C, as previously described (Frieman et al., 2009).
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