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Predictors ranked second (in reference order) appeared in other positions in the 23.2% of the times after permuting the order of the same set of variables (see Table 1 for other ranking positions).
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On the contrary, some of the contigs do not even match at all and could for this reason not be included in the reference order: Five out of originally 113 contigs were affected in the C. aurimucosum genome.
In Table 3 is shown the independent, joint and total variance explained for each of the predictors of habitat selection by Egyptian vulture in the reference order (alphabetic).
In Table 3 is shown the independent (i.e., IVE), joint and total variance explained for each of the predictors of Lesser kestrel abundance in the reference order (alphabetic).
Both programs do not predict many connections that also occur in the reference order.
In all following experiments the contig sets were composed of only those contigs that also appear in the reference order.
From these values we calculated the sensitivity (also called true positive rate,, where P is the number of connections in the reference order) as well as the precision (also called positive predictive value, ).
We counted all connections which also occur in the corresponding reference order as true positives (TP), all others as false positives (FP).
There are adjacencies in the layout graph that have a high difference in the rank of the reference order.
Actually we've just had this discussion in the office in reference to the order of the MBM/OBO/HBH on the website.
You'll Be Alright, for instance, reads in the bright colors, "Niggas get shot everyday, B". "There are clear art references and popular culture references in order to bring the viewer in for a closer examination," explains the artist.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com