In-plane samples showed higher electrical and thermal conductivities due to partial alignment of CNTs in the multiscale composites and continuity of carbon fibers in CF/epoxy composites.
In addition, the score of partial alignment on either side of a gap must be higher than the gap penalty [9].
Of course, in reality there could be other conformations with partial alignment, but they would require the excitation of higher elastic modes.
Finally, we combined the results from group A with group B by finding reads that had a partial alignment in group A and a full alignment in group B, thus accounting for the entire read sequence and ultimately representing a gene fusion candidate read (GFCR).
An alignment is considered 'complete' if at least 70% of a given protein model aligns to a contig in the assembly, while a partial alignment indicates that a statistically significant portion of the protein model aligns.
Inducing partial alignment in a molecule reintroduces anisotropic interactions, including RDCs: when not all orientations have the same probability, the dipole dipole interactions between nuclear magnetic moments does not average to zero anymore.
(e) the cost tripleGapPenalty of removing an entire codon from the first sequence, added to the score of the best partial alignment ending in a cell M [ i, j - 3, (α i, β j -3)].
(f) the cost of removing an entire codon from the second sequence, added to the score of the best partial alignment ending in a cell M [ i - 3, j, (α i -3, β j )] We adopted a non-monotonic gap penalty function, where insertions and deletions of full codons are less penalized than reading frame disruptive gaps.
The GH11 family is a highly diversified and fast-evolving gene family and phylogenies based either on full-length protein sequence alignments or on partial alignments, as in the present case, clearly do not reflect the species phylogenies and comprise very few well-supported internal branches (Fig. 4).
(d) the cost of a frameshift in the second sequence, added to a partial alignment score defined as above.
Table S7: Heterozygous sites tested for allelic imbalance in partial genotype alignment (CREB1 50-bp).
