Sentence examples for in large alignment from inspiring English sources

RNAaliduplex is designed to facility the search for conserved RNA-RNA interaction sites in large alignment data sets.

Many of the latest methods for assembling phylogenomic datasets result in large alignments that consist either entirely or largely of non-protein coding DNA (e.g. introns and ultra-conserved elements (UCEs)) [ 51- 54].

Furthermore, according to Philippe et al. (2004), missing data in large alignments do not significantly affect inferred phylogeny when resolving relationships among eukaryotic groups.

Other models based on observed sequence variability in large alignments of homologous protein sequences, such as the BLOSUM family [5], have proven popular and successful.

It is known that in large alignments bootstrap replicates will all be very similar [ 30].

The speed, together with the mouse wheel zoom feature, makes it possible to get a quick overview and easily navigate in large alignments.

However, this finding is controversial and several other studies have argued that the basal position of ctenophores could be the result of long-branch attraction (LBA) or other artifacts stemming from noise present in large alignments [ 6, 7, 13].

While the instability demonstrated earlier is more apparent in larger alignments, it can also be present when smaller numbers of sequences are aligned.

This is then discussed in a large alignment meeting (labelled the QBR Marketplace) attended by tribe leads and other relevant leaders.

The authors then proceed to identify sets of mutations that might be suitable drug targets, through an analysis of covariation in a large alignment of HIV sequences.

Reviewer 1 The input alignment used cuts out both N- and C-termini of the proteins which may have appeared messy in the large alignment due to strongly differing terminal extension lengths.