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This gene has a discrepancy in its annotation as NCBI denotes it to be a validated protein coding gene, whereas Ensembl classifies it as a pseudo gene.
A special case is BIN 20, where half of it was manually corrected due to recent changes in its annotation [ 7]. 34 TCs from the grape Gene Index were found to have high similarity to grapevine pathogen sequences, for example Ralstonia solanacearum or do not belong to Vitis vinifera and thus they were assigned to BIN 35.2 (not assigned. unknown).
The success of the WWMM will depend in part on the willingness of the community to create such dictionaries and to make sure that material produced uses the dictionary URIs in its annotation.
The notion of authority in our case is analogous to 100% confidence in its annotation.
It is becoming increasingly common for researchers to sequence multiple species related to a target species of interest in order to assist in its annotation.
The functional profile of a genome was represented by the biological process Gene Ontology (GO) terms in its annotation.
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However, we found that reads could map to both arms of their precursors, indicating a gap in its annotations (Table S4).
Bf-EVALPSN can deal with before after relations between two processes (time intervals) in its annotations, and its reasoning system consists of two kinds of inference rules called the basic bf-inference rule and the transitive bf-inference rule.
For example although the high quality INTACT [ 14] database is systematic in its isoform annotation, the isoformal interactome makes up only a tiny proportion of all its interactions.
In this study we documented that the genome of P. trichocarpa contains 38 full length TPS genes in its current annotation.
Finally, we identified 1288 putative TFs from 21 cyanobacterial genomes, among which 404 genes have not been annotated as transcriptional factor (including neither shown the function of regulation, nor possessing the helix-turn-helix motif) in its original annotation in the IMG database.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com