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SNPs that showed extreme deviation from Hardy Weinberg equilibrium (p<0.00001) in individual population groups were also excluded from analysis.
Positive selection, driven by fitness gains in individual population members, is a plausible source for the fixation of new sex determination systems.
Table 1 shows estimated percent differences from overall mean census-tract exposure levels with a 10% increase in individual population characteristics.
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QTL details in individual populations are presented in Additional files 6, 7, 8, 9 and 10.
In addition, this colinearity comparison can identify chromosome rearrangements in individual populations.
However, it seems unlikely that the increased distances of LD decay evident in individual populations should only be a result of a reduction in sample size.
Thus, genetic survey methods offer a remarkably weak predictor of adaptive divergence in individual populations or traits, because of the stochastic variation inherent in neutral processes.
The overall marker density on the consensus map (1 marker/1.46 cM) was higher compared to that observed in individual populations (1 marker/1.89 - 4.20 cM) (Tables 1 and 3).
In this scenario, common haplotypes should be more abundant than private ones in an individual population.
Genotype quality checking was performed independently in each individual population.
Additionally, PC4 was correlated with biological age for sphenoid morphology in all individual populations except the Polynesians, and PC6 was correlated with age for the occipital bone in all individual populations except the Peruvian sample (Table 15).
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