Exact(2)
Thus there are various applications of HMMs in different research areas such as in diverse sequence recognition tasks [13], in the design of automatic speech recognition systems [18, 35], in natural language processing [36], in online character recognition of handwriting [13] and signature verification [37], in bioinformatics [38], as well as in automatic translation tasks [39].
In addition, we searched exhaustively for homologs of pol γ-β in diverse sequence databanks, but found only nematode sequences related to aminoacyl-tRNA synthetase genes, with very high E value scores (data not shown).
Similar(58)
We show that the glutenin gene promoter motifs are conserved in diverse sequences in this study, with HMW-GS and LMW-GS gene promoters characterized by distinct conserved motif combinations.
However, a sequence-to-sequence alignment algorithm, using one representative sequence for a family, would not provide sufficient accuracy in terms of accounting for the insertions and deletions observed in diverse sequences.
Although the interviewees reflected on the importance of support among all levels, views differed in the ordering of attaining that support, underscoring our conclusion that the process is non-linear and may unfold in diverse sequences without a single path to successful scale-up.
In our diverse sequence set, 53% of overextensions occur in alignments that are <36% identical.
Keeping in mind the quality of the underlying data and the caveats discussed here, we encourage the use of sequence similarity networks as a first step in analyzing diverse sequence data sets because of their potential to reveal new and unexpected relationships.
In spite of diverse sequence similarity (22 73%), the whole FABP family shares a very similar tertiary structure consisting of 10 antiparallel β-strands organized into two nearly orthogonal β-sheet and two α-helices linking the first two β-strands.
Remarkably, three of the conserved exon junctions are both close to structural elements, involved respectively in protein-RNA interactions and in the regulation of sub-cellular localization, and in the vicinity of diverse sequence variations.
In this work, using diverse sequence analysis, we evaluated the repertoire of TFs and sigma factors in the community-associated methicillin resistant S. aureus (CA-MRSA) strain USA300-FPR3757.
In contrast, DDiMAP specifically maintains ROA-based collections of these diverse sequence patterns in 'dictionaries' to identify and quantify subclones within a tumor population, polyploidal organisms, or other mixed populations.
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