Exact(3)
It has been observed that the de Bruijn graph can be used to implicitly assemble these reads through linking together the same k-mer that appears in different reads [ 12, 13].
This kind of artefact usually corresponds to singletons because the probability that the same mismatch occurs independently in different reads should be extremely low [ 13], especially before position 400 bp of a 454-generated sequence [ 19].
For example, one read would be separated and placed into two contigs due to base-calling variation in different reads, and in some extreme cases, no gap truly existed between two such "contigs".
Similar(57)
Amid public outcry, the Vancouver Organising Committee of the Olympics apologised after it said it would bring in different (read: more attractive) musicians to mime the orchestra's pre-recorded material for the opening ceremony.
In summary, Bismark, BSMAP, and BS-seeker2 performed differently in different read conditions.
In particular, quality scores in different read positions are compressed in different models (i.e., based on different statistics) because it is well-known that the quality deteriorates towards the read end, hence this design improves the prediction of the scores.
Nevertheless, considerable variation was observed between different reads in terms of single nucleotide polymorphisms and length variation of STRs.
To evaluate change in different reading performance parameters after monocular ACI7000PDT corneal inlay implantation for the improvement of near and intermediate vision.
The present study examined two common mechanisms that are used to explain why reading on an electronic screen versus paper result in different reading outcomes: The Cognitive Map Mechanism and the Medium Materiality Mechanism.
We also generated a variety of Entry vectors that encode epitope tags at their N-terminus (GFP, V5, FLAG) or C-terminus (GFP, V5-His) in different reading frames to facilitate detection of the proteins of interest.
It encodes two proteins in different reading frames: p16INK4A and p14ARF, which both have 3 exons and share exons 2 and 3. CDKN2B (p15INK4B) and MTAP (methylthioadenosine phosphorylase) (not shown) are centromeric and telomeric neighboring genes respectively [3], [17], [33], [34].
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Justyna Jupowicz-Kozak
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