Second, when a fingerprint "bit" was in common between two conformers, the retained alignments to the reference shape were used to yield an (approximate) alignment between the conformers.
A second stage fine alignment is then used to accurately register the scans from the first approximate alignment.
Once approximate alignment parameters are determined and manually verified (based on known values for the MT lattice), local refinement and CTF correction is performed in Frealign (Grigorieff, 2007).
Although it is argued in some studies [ 19] that exact matching would be enough for short read alignment, an approximate alignment of a queried pattern would help on reducing the total number of required reads (coverage) for whole sequencing.
Hash tables are used in the series of FASTA programs [ 1], which calculate approximate alignments in shorter times than dynamic programming can.
DOI: http://dx.doi.org/10.7554/eLife.04806.004 We approximated the positions of the crossover points, where the two strands of actin filament are aligned vertically, using the position of the highest point (peak) in each half helix identified in the AFM images.
Historically, the retail price of electricity was set by state regulators to approximate the vertically integrated utility's average total cost of providing electricity to its consumers.
In the section, we describe the RAF inference engine for fast approximate simultaneous alignment and consensus folding for pairs of sequences.
In the 1990s further investigations were carried out to discover whether this was an accurate or an approximate solar alignment.
Due to the Van der Waals forces in the vertically aligned nanotube arrays, the direct mechanical peeling of CNT membranes from the substrate will damage the alignment of nanotubes in the membranes [17].
The BIC provides an approximate solution to the natural log of the Bayes factor: where n is the sample size, approximated here by the total number of characters in the alignment.
