Exact(6)
In addition to assembly of weapons, the AFSWP supported nuclear weapons testing.
In addition to assembly strategies, information on how many reads should be used will be helpful in experimental design.
In addition to assembly problems, there were some fungal genome projects for which TERMINUS identified very few telomeres among the raw sequence reads.
In addition to assembly, nucleoplasmin and other proteins are involved in the chromatin remodeling and nucleosome disassembly that occurs, for example, during transcription to allow the access of transcription factors to nucleosomal DNA [ 4].
In addition to assembly errors, comprehensive gene reduplication and mutations of α-defensins and/or alternative splicing might be possible explanations, although the latter was never shown for α-defensins before.
Finally, the Hybrid approach reported more true positives than any other tool (44 out of 50, 88% sensitivity), indicating that even with reads as short as 75 bp, searching for fusions among reads in addition to assembly, improves sensitivity.
Similar(54)
An additional 10 lanes of Illumina HiSeq mate-pair and paired-end sequencing has been completed and awaits inclusion in the upcoming draft assembly build 2. In addition to the assembly and annotation of the 39 features of the 16.5 kb mitochondrial genome reported here (GenBank Accession: JQ034406), these data have already contributed to two high-impact publications (12, 24).
In addition, to obtain assembly statistics profile about reads that could be mapped back to the assembled unigenes, TopHat (version 2.0.8) (released 2013-02-26, http://tophat.edu/.umd.edu/) [ 44] with the parameter "mate-inner-dist = 250", was used to align short reads to the constructed transcripts by de novo assembling.
In addition to spindle assembly checkpoint components of presumably known function, we also require a better understanding of the role of other spindle assembly checkpoint proteins, especially the myriad of kinetochore-resident kinases.
In addition to Velvet assemblies, two iterations of assembly (one for normally trimmed reads and one for stringently trimmed reads) with CLC genomic workbench with default settings (Insertion/deletion cost = 3, mismatch cost = 2, 80% of read length with similarity of 90%) were carried out for each pepper genotype.
In addition to chromatin assembly, ASF1 cooperates with SWI/SNF family of ATP-dependent chromatin remodelers and H2A/H2B chaperone FACT to displace nucleosomes from active promoters [12], [13], [14], and in Drosophila ASF1 cooperates in vivo with the BRM chromatin remodeling pathway [15].
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