In addition to an existing repeat library, TREP complete annotation (http://wheat.pw.usda.gov/ITMI/Repeats/, 20 September 2013, date last accessed), a de novo repeat family constructed using RepeatModeler (http://www.repeatmasker.org/RepeatModeler.html, 20 September 2013, date last accessed), was used for repeat detection.
Point mutations disrupted the repeat pattern, and in addition to a new class of repeat motifs, size variations at microsatellite loci caused by indels (insertions or deletions) in flanking sequences have also been reported.
Several improvements, in addition to a larger sample and more repeated measures, would have increased confidence in the results of our study.
Thus, the solution for the problem of the biosynthesis of both squalene and botryococcene in B. braunii Showa involved the evolution of a novel enzyme system in addition to a conserved 22-producing SQS by repeated gene duplications and neofunctionalization of the paralogs.
In addition to a long-range ∼40-residue repeat, tropomyosin is the paradigm of the α-helical coiled-coil class of proteins.
In addition to a lower CRC prevalence at repeat screening, there may also be other disease spectrum differences.
The tumours have been analysed with BAT-25 and BAT-26, in addition to a total of 19 dinucleotide repeats.
In addition to a large number of satellite repeats, we detected novel transposable elements (not detected by BLAST (blastn) comparison to the TIGR repeat database above, presumably because no similar elements are present in that collection).
For use in REPET's classification steps, we provided REPET with the PIER database, in addition to a set of seven conifer repeat libraries described in Nystedt et al. (2013).
Analysis of repetitive genomic regions (fig. 1) showed high genomic repetitiveness in VSG regions and annotated repeats, in addition to a number of unannotated regions (e.g., the end of chromosome 9).
