Sentence examples for in a logical model from inspiring English sources

While most of the data described in a logical model for biomolecular simulations can be directly parsed from the input and output files, dictionaries containing standard definitions and values for certain data elements need to be prepopulated.

For example, the feedback loops, signaling paths and global interdependencies in a logical model are equivalent to the ones of the interaction graph from which the logical model was constructed.

One can easily test the effect of interventions in a logical model: taking the same scenario used above and assuming in addition that the catalytic activity of MEK was inhibited (i.e., removing the downstream edge of MEK, MEK → ERK), all species that showed oscillations in the previous simulation now reach a steady state.

The system consists of a group of Active Vision Agents (AVAs, in short) representing a logical model of a network-connected computer with an active camera.

In this method, a logical model is first used to simulate a large network and to identify the sensitive nodes in the network.

In addition to regulatory functions like those in Eq. (1), a logical model must also specify how the node state variables change with time based on these functions, that is, we need to specify an updating scheme.

In this paper, we analyze a logical model of the mammalian cell cycle network and its threshold Boolean network equivalent.

As already stated above, the ODE system that is derived from a logical model in the presented way is not a mechanistic model.

In this article, the authors present a logical model of protein-protein interactions that allows to take into account the modifications induced by the interaction at certain residues.

At a more abstract level the concepts introduced in this logical model provide a good starting point for the creation of a new terminology or ontology specific to biomolecular simulations.

However, reviewers attempted to categorise the studies in a meaningful and logical model, but were unable to recognise any consistent evidence to support the effectiveness of community-based interventions to enhance PA level.