To improve the alignment quality, the outgroups were removed, the sequences re-aligned, and a final tree built using the same methods with midpoint rooting.
All ITS sequences were aligned using Clustal W [ 77], with manual gap adjustments made to improve the alignment (see additional file 2, nexus.doc).
There are also new options to improve the alignment.
Additional fiducial points were added in those regions to improve the alignment.
By this way, it can not only skip the complex model of flexure angle, but also improve the alignment performance.
This paper proposes the notion that mobile agent technology can improve the alignment between IT systems and the real world processes they support.
The DARTEL registration involves iteratively computing the study-specific template, based on the average tissue probability maps from all participants, and then warping all participants' tissue maps into the generated template to increasingly improve the alignment.
This out-of-plane polymer 3D microlens array is pre-aligned with the fiber collimator arrays with no additional adjustment and assembly required, therefore, it helps to dramatically reduce the running cost and improve the alignment quality and coupling efficiency.
Quality function deployment (QFD) is an integrated decision-making methodology that can assure and improve the alignment of elements of design and construction processes with the requirements of customers.
They were there to listen as part of the Future Resilience for African Cities and Lands (FRACTAL) programme, a co-production effort designed to improve the alignment of research and policymaking in nine southern African cities. Sub-Saharan Africa's urban population is projected to double in the next 25 years.
Gaps are indicated by dashes to improve the alignment.
