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The permutation importance was computed with the conditional permutation scheme proposed by Strobl and colleagues, which controls for the correlation of the predictor variables [ 27].
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The final importance is computed by arithmetic means.
To determine which variables (biochemicals) made the largest contribution to the classification, a variable importance measure was computed, termed the mean decrease accuracy (MDA).
The Importance Value Index (IVI) was computed by summing up relative density, relative frequency, and relative dominance.
A study of herbaceous vegetation was carried out through line interception (2 m) method and importance value index (IVI) was computed for all species encountered in the fields using the relative density (RD), relative dominance (RDom) and relative frequency (RF) (Kershaw and Looney 1985; Roberts-Pichette and Gillespie 1999).
This accuracy importance measure (increase of MSEOOB) was computed for each tree and averaged over the forest (1000 trees).
First, a full model including all SNPs was computed to estimate the importance of each SNP.
RAS was computed daily.
At each position j, the total importance can be computed by summing the absolute importance of all k-mers at this position, weight_mass k (j)=σ z ∈Σ k ∣ Q z, j)∣.
The idea is simple that training data and test data clustered in one small enough region can be thought to have the equal probability and then the importance can be computed with the ratio.
Average importance ratings were computed for each cluster and labels were assigned to them based on the names proposed by the participants.
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