Alignment is a computationally difficult problem and many software applications implementing different strategies and methodologies are available.
The methodology allows implementing different architectures for the same behavioral model, each one presenting different abstraction level, accuracy, speed, and convergence performance.
This has led to an increase in studies aimed at analysing and preventing dropout, implemented under different methodologies that are reported in this article.
In this report, we implemented two different methodologies, DMTSS and HTPS, designed for genome-wide TSSs mapping.
In fact, although Holm claimed to be using MSC-CCA, for his Figs. 2 4 he used a MatLab code labeled "gcs_cca_1D.m" (see paragraph 2 of his Section 3), which Holm also modified, that implements a different methodology known as the Generalized Coherence Spectrum using the Canonical Correlation Analysis (GCS-CCA).
Different methodologies of implementing MB recoding logic are explained in [13,14].
Different methodologies have been implemented to get proper knowledge in the subject, but no general model has been established yet to predict the effect of landuse/land cover changes (Kokkonen and Jakeman 2002).
Two commercially available molecular assays using different methodologies have been implemented in South Africa -- the GenoType MTBDR plus ('MTBDRplus,' Hain Lifescience, Nehren, Germany) and the Xpert MTB/RIF ('Xpert,' Cepheid, Sunnyvale, CA).
Four predictors were selected, spanning six different methodologies of disorder prediction: DisEMBL (implements three methods) [ 37], GlobPipe [ 49], IUPred [ 50] and VSL2B [ 51].
Microarray is a rapidly implementing technology and the commercially available platforms show unique genomic targets and use different methodologies for probe design and for detection of signals, resulting in different level of sensitivity [ 27, 28].
