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We have implemented this constraint by extracting data from all conditions and fitting a response function to the first principal component of the data.
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To implement this constraint, we modified the algorithm in ref (22) by adding to each iteration step (which consists of a minimization of || E|| over S, followed by a minimization of || E|| over C) a minimization of the concentration error | EC|, where EC = {1 ∑ k = 1 K c p { k }}, over a position-independent scaling of the concentration of each component, using the same minimization algorithm.
Having thus implemented the constraint that ln R1 = ln R, it follows that H = N = dmR1/ m.
By implementing this method, the constraints of the features in modular assembly parts can be transferred to interface geometries.
Algorithms implementing this and other constraints have been previously developed (Berry et al., 2007; Gao and Church, 2005; Peharz and Pernkopf, 2012; Zheng et al., 2006) and could be applied to cancer genomics data.
The first rule implements the constraint that low-frequency sources should not be panned.
Implementing the constraint in the positioning process provides much more precise results compared to the unconstrained case.
We describe how to implement these constraints in a complete time-domain, and the adaptive method.
In this study, we implemented a constraint-based sampling approach on an updated genome-scale network of yeast metabolism to systematically determine how EM level variations are linked to global changes in intracellular metabolic flux states.
It has been implemented using the constraint logic programming software Prolog IV.
Note that in those works, the randomization approach is implemented without additional constraint.
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