Sentence examples for implemented in the packages from inspiring English sources

The simplest is POA (Partial-Order Alignment); a similar but more generalized method is implemented in the packages SAM (Sequence Alignment and Modeling System).

The structural features, transition state and energy parameters for taurolidine and its derivatives were analyzed with theoretical methods using the density functional theory (DFT) program DMol3, implemented in the packages Cerius2 4.6 (SGI platform) and Materials Studio 4.4 (PC platform) from Accelrys [46] [48].

All the statistical analysis were performed using the R environment (R Development Core Team) [ 31] using functions implemented in the packages vegan, ecodist and ape.

For every network, parameters were measured using functions implemented in the package igraph.

Our method is implemented in the package EMATRIX, which is available on the Internet at http://motif.stanford.edu/ematrix.edu/ematrix

We inferred the population demographic history using methods implemented in the package ∂a∂i (version 1.60), which is based on the joint site frequency spectra between multiple populations16.

We used a hierarchical Fst analysis as implemented in the package HIERFSTAT32 in the statistical software R33 to compute microsatellite pairwise genetic differentiation among host races.

The models implemented in the package are discussed in the next section in detail.

The following models are implemented in the package with appropriate simplifications.

SCRUB is an algorithm for artifact suppression in sparsely sampled NMR data, implemented in the package nmr_wash.

The method was implemented in the package EIGENSTRAT and is referred to as Eigenstrat method.