Sentence examples for implemented in the library from inspiring English sources
These command line utilities serve as reference implementations of the routines implemented in the library and can readily be used for atomic tasks in NGS data processing.
Gene Set Enrichment Analysis (GSEA) was done using the method single-sample GSEA (ssGSEA) as implemented in the library GSVA (function gsva, method = "ssgsea") from R. Default parameters of this method were used as described by Barbie et al. [23].
Briefly, a hierarchical algorithm combining an adaptation of the Soundex phonetic algorithm to the Portuguese language and a similarity score for strings implemented in the library difflib from Python [15] was used to determine the degree of similarity between records in the databases.
Here, we introduce BiopLib, a C library for the manipulation of protein structure and sequence, and BiopTools, a set of programs written in C which use many of the functions implemented in the library.
This approach is implemented in the ProMC library which produces smaller file sizes for MC records compared to the existing input output libraries used in high-energy physics (HEP).
We evaluate linear support vector machines (SVM) as implemented in the LibSVM library, as well as LibLINEAR, a specialized implementation for processing large data sets, and naive Bayes classifiers.
For the cubic spline interpolation, we used the functions implemented in the SciPy library [19].
In this way, after we compute the gray scale image of the fingertip probability map, contours are extracted from the FindContours function implemented in the Intel OpenCV library.
Another algorithm that considers the Fourier spectrum sparsity restrictions is the so-called FADFT-2 reported and implemented in the AAFFT library [22].
Improved algorithms for determining cycle membership and the uniquely defined essential and relevant cycles have been implemented in the CDK library.
In the paper we study the performance of the regularized boundary element quadrature routines implemented in the BEM4I library developed by the authors.
