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Strickler sees this in a larger framework.
The tools are usually implemented in a pipeline framework ranging from simple R scripts to full workbenches with large collections of tools (such as the Galaxy [8] or Apache Taverna [9]).
Current genome-wide association studies (GWAS) are normally implemented in a univariate framework and analyze different phenotypes in isolation.
Bellamy's idea is easily implemented in a Bayesian framework.
We also applied more general and parameter rich models of evolution, implemented in a Bayesian framework.
Analyses were implemented in a Bayesian framework using the software SIRBAYES [ 24, 26].
In this context, structural models implemented in a Bayesian framework are especially appealing, while REML approaches [ 3, 27] are expected to be suitable to study the genetic heterogeneity of residual variance in large populations.
The fit of the models implemented in a Bayesian framework was estimated by cross-validation, as implemented in PhyloBayes 3.0 [ 43].
The overall SIR model described above was implemented in a Bayesian framework and fitted using Markov chain Monte Carlo (MCMC).
The model may also be implemented in a maximum likelihood framework to estimate the locations of origin and terminus.
The models are implemented in a maximum likelihood framework and tested using a likelihood ratio test (LRT).
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