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All analysis steps were implemented in a custom Matlab program.
Real-time filters were implemented in a custom built BMI system running on a workstation with an Intel Xeon 2.2Ghz processor.
Tm was calculated according to the formula above from the sequence composition of each probe, as implemented in a custom Perl program.
This step was implemented in a custom Perl script that used the Semi Global Smith Waterman algorithm within a TimeLogic DeCypher system (Active Motif, Inc .. Furthermore, sample tag and primer sequences were trimmed, and the pre-processed reads of each multidimensional pool were saved separately to the database.
A bidirectional best hit (BBH) algorithm was implemented in a custom Python script.
Short read processing, mapping, and miRNA gene inference were implemented in a custom bioinformatics pipeline (fig. 1 C; supplementary methods, Supplementary Material online).
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These equations, coupled with one-dimension equations (1D) for the aluminium capsule and for the water, were implemented in a custom-designed program.
These leaf cells are generally implemented in a full-custom design flow as they are optimized to form the foundation or library of cells that are used repeatedly to build an entire design.
Benefits of our approach are demonstrated using a case study and some custom software applications implemented in a Field-Programmable Gate Array (FPGA).
The WSINE1 element was studied in further detail using a custom approach for identifying commonly occurring insertions/deletions (indels), implemented in a perl script (available on request).
Retrieval of spot instance prices for all regions was implemented automatically in a custom python program get_spot_histories_all_regions_all_zones.py.py
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