Secondary structural predictions for ribosomal and transfer RNAs were ascertained by implementing a comparative structural framework [ 51- 55] (for an online tutorial see the jRNA web site: http://hymenoptera.tamu.edu/rna/), in conjunction with a thermodynamic-based RNA folding algorithm (mfold; [ 56]).
In this study we sought to identify differentially expressed genes related to the semigamy genotype by implementing a comparative microarray analysis of anthers and ovules between a non-semigametic Pima S-1 cotton and its doubled haploid natural isogenic mutant semigametic 57-4.
To assist user in examining the extent of shared loci between maps, we have implemented a graphical comparative map viewer, which highlights inverted loci.
To select specific inhibitors for the STAT protein of interest, we designed and implemented a five step comparative virtual screening tool, which we named – CAVS (comparative approach for virtual screening).
For the data stored in the workset, YeastWeb implemented a number of comparative genomics and molecular evolution analysis tools to allow users to view the multiple sequence alignment and phylogenetic tree of a given gene family.
For comparative purposes, we implemented a multivariate model, since the bivariate model could lead to false positive edges such as the ones in Figure 2(c), compared with the true network (Figure 2(a)).
We implemented a database, DroughtDB, for the representation and comparative analysis of drought-related genes in higher plants.
Purpose/Objective: The Research Team planned and implemented a research evaluation focused on client views and perceptions and provided a comparative analysis with similar research conducted in 2008.
We implemented a protein sequence-centric web application to store, organize, interrelate, and present heterogeneous data that is generated in manual genome annotation and comparative genomics.
Here, we employ a comparative framework, implementing a phylogenetically informed statistical approach, and analyse an extensive dataset of avian eggshell samples to quantify the extent to which metrics of eggshell colour are evolutionarily conserved across levels of varying biological organization.
