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The modular design and implementation of the pipeline facilitates a posteriori integration of different phase retrieval algorithms as simple Python functions.
The FastFlow implementation of the pipeline, loop, and farm patterns is exploited to design the CWC simulation workflow.
Owning the source code for the ApicoAP training routine enabled us to provide the implementation of the pipeline.
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Further, we propose an implementation of the pipelining technique in OpenMP.
The implementation of this pipeline results in significantly improved multiple sequence alignments and SNP identifications when compared with existing solutions.
We observed a number of previously underestimated problems with extraction of histology-based information, in particular, related to the large extent of microscopically apparent tissue shrinkage, which can be countered by addition of live-tissue MRI prior to the implementation of this pipeline.
To test and verify the BioC implementations of the pipelines, we used the NCBI disease corpus (9, 10) as a model corpus.
The details of implementation of the updated pipeline were described in Results.
Structural variants (SV) were identified using a local implementation of the SVmerge pipeline [ 92].
We thank Anju Varadarajan for her assistance in the implementation of the bioinformatics pipeline.
In the implementation of the GATK Best Practices pipeline, the latest versions of BWA, Picard and GATK are supported.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com