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To this end, we chose an audio feature called "spectral compactness", with an implementation available from the jAudio feature extraction library [81].
Tropism was also predicted using the 11/25 [ 39] and 11/24/25 [ 40] rules (software implementation available from the corresponding author on request).
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For SVM algorithm, the LIBSVM implementation available from http://www.csie.ntu.edu.tw/~cjlin/libsvm/ was utilized, which was originally developed by Chang and Lin [ 28].
Regarding SVM, LIBSVM implementation available from http://www.csie.ntu.edu.tw/~cjlin/libsvm/index.html was utilized, which was originally developed by Chang et al. [ 33].
Descriptor implementations are available from the CDK and JOELib, as well as via remote web services such as XMPP [64].
Although the technical details of the underlying implementation are not available, from the output it can be determined that structures sharing a common substructure are organized in the same class, and the common substructures define the scope of each class.
Other implementation details are available from the software documentation.
Availability and implementation: vHOG is available from the Bgee download site (http://bgee.unil.ch/), as well as from the OBO Foundry and the NCBO Bioportal websites.
The European Union provides a good setting for such a study, because tobacco control implementation data are available from the Tobacco Control Scale (TCS) [ 18], while Eurobarometer surveys [ 19] provide data on denormalisation, smoking prevalence, and support for tobacco control.
Availability and implementation: PSI-Search is available from the authors as a standalone implementation written in Perl for Linux-compatible platforms.
Computer codes and instructions for the implementation of 3DMIPS are available from the author.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com