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However, if inferred LGT events are to be compared, it must be possible to evaluate them all in light of the complete reference tree.
In order to check if inferred phylogenetic relationships were product of bias in taxonomic sampling, a tree was constructed with 16S genes for all Campylobacter species available in SILVA (Pruesse et al. 2007) (as author request).
In particular, Alexander et al. (2009) found that the European admixture proportion in the individuals of Mexican ancestry genotyped by HapMap III was ∼20% if inferred by the algorithm ADMIXTURE, while it was inferred to be ∼50% by the algorithm STRUCTURE using the same data set.
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Supplementary Table 4 shows that 45.91% of them were greater than 0.78; thus, the co-expression relationship of these genes was not very obvious if inferring from PCC values, compared with those after heat shock treatment.
Missing fields were, if possible, inferred from other data (eg, if sex was not recorded but the patient's name was Mary, female gender was assumed).
If he inferred that it was Livingstone, it must have been from those sorts of premise that he did so; he had nothing else to go on.
[View clip here, about 3 mins in] If you inferred from this that Soros was personally responsible for bringing down currencies and collapsing regimes, then you would be on the right track, at least according to Beck's way of thinking.
The four-taxon trees, if correctly inferred, can be used as input of quartet-based methods in order to reconstruct larger trees.
Clonal complexes, if accurately inferred, are groups of strains that share a more recent common ancestor than with strains outside the complex but are not identical to each other at all of the MLST loci (10, 13, 14 ).
If non-inferiority was demonstrated, superiority would be inferred if this two-sided 95% CI was positive.
If the nodes are leaf nodes they can be inferred, if they are not they are more difficult to infer.
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