For a single miRNA, the output can generate two tables: one describing a list of mRNAs and the other showing a list of GO IDs targeted by this miRNA.
The list can also be sorted by ChEMBL target id, target name, and by the number of selected compounds by clicking on the corresponding column heading.
More recently, a variety of other materials have been considered, including W, Pb, Pt, Pd, and Ag for the DD target coating and Au, W, Pb, Hg, Ta, Cs, and Hf for the hohlraum wall of the ID target.
Registry name, trial ID, target sample size, recruitment status, date of registration, date of first enrolment and the public and scientific title for each record were downloaded from the ICTRP database and imported into Excel on 17 June 2009.
Users can query ZFNGenome using several different criteria (e.g., gene ID, transcript ID, target site sequence).
Searches can be dynamically filtered by gene name, miRBase ID, target prediction algorithm, disease, and any nucleotide distance between dSNPs and miRNA target sites.
Searches can be filtered by gene name, miRBase ID, target prediction algorithm, disease, and any nucleotide distance between SNPs and miRNA target sites.
Using the probe ID target sequences from the Affymetrix website, primers were designed to allow for real-time amplification of the chosen Cbf genes.
For each pre-miRNA, miRIAD provides a 'Summary' section with the official miRNA symbol, its full name, miRBase ID, target genes and the genomic context where each miRNA is mapped.
First, EST-SSRs (ESTs containing SSR) with no BLAST hits to known genes were excluded; second, unique SSRs for each dataset were generated by comparing them to all public cotton microsatellites deposited in CMD http://www.cottonmarker.org according to sequence ID, target SSR, and primer sequences; and third, internal companions among the three datasets were conducted to reduce redundancies.
