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Techniques like X-ray crystallography, NMR spectroscopy or 3D structure modeling can provide even more molecular details by identifying the interacting atoms or residues in the protein binding sites (Aloy and Russell, 2006; Finn et al., 2005).
5) The authors present a number of criteria for identifying the interacting protein as myosin-1c.
The CCCP method focuses on identifying the interacting proteins; thus, there is no requirement for the reactive groups to covalently attach to proteins.
What is the evidence for this? 5) The authors present a number of criteria for identifying the interacting protein as myosin-1c.
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These interactions can also help to identify the interacting pathways between cliques.
It would be interesting to identify the interacting partners of MYC2 TFs in N. attenuata and characterize the mechanisms of interaction to understand how the signaling components evolved.
We then wanted to identify the interacting network among the altered genes in the context of other large biological pathways.
Interestingly, the user can also identify the interacting partners within HypoxiaDB and elucidate major hypoxia-linked pathways/networks.
We identified the interacting pair(s) of transcription factors (TFs) based on the spatial proximity of their binding sites.
To identify the interacting pairs in a tissue, tissue specificity information of the target genes was included.
Finally, for each combination C identified by the above search steps, we calculate the KWII v, P) ∀ v ⊆ C to identify the interacting combinations, { v, P}.
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