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Since the e-value cut-off is imposed on individual hsps (high-scoring segment pairs) and several hsps compose a complete genome match, small hsps such as those corresponding to an exon that might have been partially sequenced at the beginning or end of an EST would not be aligned to the genome accurately if the e-value is set too low (i.e. if the stringency of identifying a match was too high).
Similar(59)
This method is usually an extremely reliable technique for identifying a matching DNA.
The adoption team called last week with the news that they have identified a match for Reggie, and my heart lurched.
Once it identifies a match, it sends an email to students, seeking their approval, only making an intro if the student gives them the go-ahead.
First, how do they identify a match between your skills and a particular position without resorting to keyword searches like competitors.
The highest level of security only incorrectly identifies a match 0.01percentt of the time, the middle tier has an FMR of 0.1percentt, and the lowest level of security has an FMR of one percent.
In the middle security tier, where a sensor incorrectly identifies a match 0.1percentt of the time which the researchers described as a "realistic security option"—they were able to spoof digital fingerprints 22percentt of the time.
Blast searches of the G. lamblia genome databases identified a match for HRP1, which has five RNA binding domains [34].
The PDM algorithm identifies a match with 39% sequence identity in Chromobacterium violaceum phosphoribosyl-atp pyrophosphatase (PDB 2a7w, chain A, EC 3.6.1; Figure 2b): six amino acids (K40, E43, E47, E63, E44, D66) with Cα atom distances between that each match those of their template counterparts within ±2.5 Å.
When comparing the binding sites of these proteins superpose3D identified a match comprising eight pseudoatoms belonging to six residues with an RMSD of 0.68 Å. Interestingly the phosphorylcholine esterase is complexed with its phosphocholine substrate while the methionine aminopeptidase is bound to an aminoacidic inhibitor.
Matching identified a match for half of the SLE cohort (N = 6,707).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com