Sentence examples for identify template from inspiring English sources

For a given query sequence, TASSER first threads the sequence through the PDB to identify template proteins that may have similar topology to the query.

eThread integrates ten state-of-the-art single threading algorithms to accurately identify template proteins, which can be subsequently used in both structure modeling and functional annotation.

The protocol uses the differences in melt curve shape and Tm of each melt curve to identify template nucleotide sequence similarities within a large group of samples.

Unlike the traditional application for melt curve analysis, where 1 base pair differences are detected through a change in melt temperature of a fully base-paired hybrid and mismatched hybrids, the current study uses differences in melt curve shape and the Tm of each melt curve to identify template nucleotide sequence similarities within a large group of unlike PCR fragments.

The images were processed in real time to identify template-containing wells and to compute associated signal intensities.

We identify templates for comprehensive search definitions and describe algorithms to perform content-based searches for mechanical assemblies.

To identify template-ligand pairs, the DrugBank drug-target relational database [57] and the ChEMBL bioactivity database [58] are used.

Using databases to identify templates is therefore crucial in this respect.

Three distant homology recognition tools, Phyre [51], Shrimp [43] and PROCAIN [45], were used to identify templates spanning the complete PfCRT sequence (see Table S2, Table S3 and S4).

To identify template-directed variations, sequence reads with 3 nt and less difference at the 5'- and 3'-ends from the most frequently sequenced reads derived from both arms were retrieved and quantified.

A systematic literature search was performed to identify templates published after 1 January 1990 and up to 19 March 2012.