Sentence examples for identify a module from inspiring English sources

For each dataset we used each method to identify a module (or a set of genes for t-test) that is up-regulated, down-regulated or differentially expressed in the cases compared to the controls.

For three datasets (SLE, LESNICK-PD and ASTHMA) we found that all the methods failed to identify a module that overlapped with the KEGG pathway (as we show later, in at least one of those cases (LESNICK-PD) we identify multiple potential biological insights from the DEGAS module).

After we identify a module, we deflate the matrix by subtracting the signal of current set of loadings and latent variables from the data matrices.

Using Weighted Gene Analysisssion NetWGCNAAnalysis (weCNA) we identify a module (group) of highly related transcripts, correlated with IA lesion size.

The basic operation of this algorithm is to identify a module on the weighted graph by expanding a kernel node set, which originates from a given 'seed' node used as starting-point.

By applying this strategy to a CFS data set consisting of microarray, SNP and clinical trait data, we identify a module of 299 highly correlated genes that is associated with CFS severity.

We identified a module which may be associated with direct nutrient transport, signal transduction and regulation in nutrient deficiency conditions in rice.

Finally, our method identifies a module including RB1 and a metagene DKK1/PRKG1/CSTF2T significant at p1 <0.001 and p2 = 0.02 levels.

In particular, we identified a module that is predominately activated in breast cancer and is involved in tumor suppression.

Our network analysis identified a module that was highly related to atherosclerosis in the IA and this module was highly enriched for genes in activated macrophages and spleen.

We also identified a module of tumor cells which seems to correspond to a new subtype that has not been identified before.