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In-depth discussions among the participating experts at the beginning of the project, who had a good overview of the ongoing HIV/AIDS activities in Haiti, helped to identify a draft list of general competencies.
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We performed a BLASTP search of the Ensembl Ae. aegypti genomic database (http://www.ensembl.org/) using the non-sex-specific region of Anopheles gambiae DSX protein (236 aa) as a virtual probe, and we identified a draft sequence located in supercontig 1.370 encoding a putative protein region 68% identical to the corresponding region encoded by An. gambiae dsx (Angdsx).
While our inability to identify certain homologs may be due to their absence in draft assemblies, we did identify a lysR-type gene within several draft genomes (e.g. XBFFL1v2_2160021) that is absent in the complete Xb-Sj genome.
A novel BVMO encoding gene was identified from a draft genome sequence of a newly isolated strain of Dietzia.
Based on the identified definitions, a draft operational definition to assess peer violence among adolescents in schools was formulated.
Genes exhibiting polyadenylation-mediated creation of termination codons in the Blastocystis sp. subtype 1 were identified in a draft genome assembly obtained from 454 and Illumina reads (Gentekaki E, Curtis B, Roger AJ, unpublished data) using EST data available for this isolate (Stechmann et al. 2008).
We used the draft genome both to identify a vast number of SNPs and to perform comparative genomic analyses.
We then show how they were useful to identify problems in a draft of the pig genome assembly, and how the RH maps enabled the problems to be corrected in the porcine genome sequence.
Hence, a range of frequency values have been identified against which a draft pad must be tested for fatigue response.
Clusters of Hox-related homeobox genes were identified by screening a draft assembly of the Nematostella genome with a dataset of 123 Nematostella homeobox sequences [52].
A recent study based on the 4th assembly of the draft zebrafish genome (Zv4) identified a total of 89 OlfC sequences, including 38 partial sequences [ 37].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com