Sentence examples for identify a common sequence from inspiring English sources
We were unable to identify a common sequence motif using standard tools (e.g., MEME, [ 30]) and are currently attempting to combine structure alignment algorithms to this end.
Since we detected close to thirty major KAP1 peaks on the HCMV DNA and failed to identify a common motif amongst all these sequences, more than one DNA-binding protein, whether or not KRAB-ZFP, is likely involved in docking the corepressor at these sites.
The de novo assembly also provided extension of the amino and carboxyl sequence of chromosome 1-4 and identified a common telomere sequence (TAACCC) and reverse complement (GGGTTA) respectively [ 24] which is found in all vertebrates [ 25].
Furthermore, alignment and comparison of all flanking sequences of TCAST-like elements did not identify any common sequence motifs.
HTS can also reduce the number of sequences needing to be tested in vitro, when coupled with bioinformatics, by identifying clusters of oligos with a common sequence or structure [ 28].
In an attempt to further account for the co-enrichment of these mRNAs we also used a number of bioinformatics algorithms to investigate whether a common sequence motif could be identified in these transcripts.
Bioinformatics analysis of the genome sequence identified a common 19-bp motif within the upstream region of 31 genes, whose differential expression in C. glutamicum IB2103 was verified by real-time reverse transcription PCR.
We have identified a common structural motif that is encoded in all class B GPCR-ligand N-terminal sequences.
In order to identify cliques with common sequence pairs, a subalignment graph is computed in which each subalignment is represented by a node and undirected edges are drawn between subalignments having at least two sequences in common.
Genetic association studies typically seek to identify common sequence variation indirectly associated with a trait.
Given two input sequences s1 and s2, its goal is to identify the largest common sequence of characters between s1 and s2.
