Sentence examples for identifies templates from inspiring English sources

Automated comparative modelling of 3D protein structures, which identifies templates through sequence identity on the Swiss model server, provides the most accurate model by: (i) finding the known structures (templates) associated with the sequence to be modelled (target); (ii) aligning the target sequence with the templates; (iii) constructing the model; and (iv) measuring the model (10).

Secondary and tertiary structural predictions were performed with I-Tasser software that identifies template proteins with similar folds from the PDB library, and predicts a model through a series of protein-modeling algorithms [ 49].

We identify templates for comprehensive search definitions and describe algorithms to perform content-based searches for mechanical assemblies.

By applying the strategy to the previously identified templates, quinoline 4 and pyridines 16a, 16b, and 17 have been identified as subnanomolar or nanomolar inhibitors of human DPP-4.

Using databases to identify templates is therefore crucial in this respect.

Three distant homology recognition tools, Phyre [51], Shrimp [43] and PROCAIN [45], were used to identify templates spanning the complete PfCRT sequence (see Table S2, Table S3 and S4).

It was found that the average TM-score [31] of the first identified templates can be increased by 2.5% with the introduction of the torsion angle restraints, where the difference between ANGLOR-predicted angles and the experimental angles in templates was added to the profile-profile alignment scores.

Second, the inclusion of apo proteins potentially reduces the quality of identified templates.

A systematic literature search was performed to identify templates published after 1 January 1990 and up to 19 March 2012.

The first step is to identify templates that have a similar structure to the protein to be modeled (target).

A systematic literature review will be conducted to identify templates for reporting pre-hospital major incident medical management.