Exact(2)
This is of particular importance when molecules have been input via InChI identifiers, which do not distinguish between resonance structures.
Standard terminologies organize the concepts of a particular domain into a taxonomy (e.g., e pilepsy is a seizure disorder, which is an abnormality of the central nervous system), assigning them identifiers which do not change with new versions.
Similar(58)
We set to null identifiers which did not pass a series of quality control checks, which were implemented with custom C# functions.
For proprietary reasons vendors very often provide only a consensus or representative sequence identifier which does not necessarily correspond to the original sequences used for probe design.
This concept differs from anonymization, which is a one-way process of removing the linkage between personal identifiers with research identifiers and which does not allow for subsequent updating of the data.
Mentions which do not map to a specific identifier are ignored and mentions which can be assigned to both a MeSH and ChEBI identifier are only assigned the MeSH identifier.
Which do you avoid?
Which do you want?
If all InChI components have to be taken into account, it is best to use the CHsI/X⇔Y method, which only requires that InChI identifiers be compatible and which does not ignore any information.
This process separates the linkage (which requires the use of personal identifiers) from the analysis (which does not) and provides a robust mechanism for preserving individual privacy [ 15].
For comparative purposes, an estimated 'worst case' false match rate is also presented in Table 4. Overall, 76289 matches were identified in stage 3: 60780 using keys incorporating assessment date, a further 7255 using keys with assessment team identifier, and 8254 using keys which did not include assessment data (Table 5).
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Justyna Jupowicz-Kozak
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