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Identifiers from multiple databases can be separated by '|'.
The underlying iRefIndex data aggregation is a rigorously documented procedure that not only combines equivalent protein identifiers from multiple databases but also maps different protein splice isoforms of the same gene to their canonical representation.
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Identifier groups from multiple sources, such as public databases and private chemical libraries, can be imported into the same MetMask database.
To obtain maximum coverage across the heterogeneous evidence sources, we developed dictionaries of drugs and AEs using identifiers and alternative names from multiple medical terminologies.
Users may search for their gene or function using a rich search syntax (Section 4) permitting entry of gene or protein synonyms from multiple identifier systems, and text-matching within gene or function descriptions (Fig. 1A).
Thirdly, it can reveal genes and metabolites to which a pathway database assigned multiple identifiers from the same genome or metabolite database, respectively.
If multiple identifiers from the same database could be assigned to a single element, BioModels.net biology qualifier [ 71] has version was used.
Our goal was to identify all possible identifiers and alternative names for each drug and AE from multiple terminologies.
We present AmalgamScope a new interactive software tool focusing on assisting scientists with the annotation of the human genome and particularly the integration of the annotation files from multiple data types, using gene identifiers and genomic coordinates.
Additionally, protein sequences were absent from the PSI-MI XML files and were separately retrieved from multiple sources depending on the protein identifier used.
Chen et al [ 6] developed a Network-Identifier method untilizing a thermodynamic model to infer regulatory relationships from multiple time course gene expression datasets.
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