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Interestingly, the H5 epitope for the human antibody AVFluIgG03 overlaps with epitopes recognized by mouse mAbs on a mouse-adapted duck H5N2 virus (A/Mallard/Pennsylvania/10218/84) identified by the sequence analysis of virus escape mutants [29], [30].
Finally, three historic B. rapa genomes, identified by the sequence divergence values of their syntenic segments, were reconstructed, clearly showing the trace of recursive WGD events.
The aa sequences of protease domains containing an intact catalytic triad as identified by the sequence alignment were phylogenetically analyzed using the maximum likelihood (ML) method.
We observed that the three major groups identified by the sequence signature method reflect three major environmental temperature conditions: north temperate, north tropical, and south tropical.
The annotation file consists of rows of data identified by the sequence ID in the first column, and subsequent named columns providing arbitrary text annotations.
The solo-LTRs and additional integrase domains we find in this species, were all identified by the sequence of the complete element in this species, and not by any of the element sequences in D. yakuba or D. erecta.
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All the fragments were found to have a high identity with an α/β-hydrolase domain-containing protein identified by the sequencing of the complete genome of Shewanella frigidimarina NCIMB 400.
The novel SNPs were identified by the sequencing of 58 individuals.
It is then followed by the beta path identified by the models' sequence (16b).
The output of MiRABELLE is a "miR activity matrix", providing the activity scores for each miRNA family (identified by the seed sequence), and each sample.
The function will sequentially process each region identified by the distinctive sequence names in the positional input.
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