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It is worthy of mentioning that both WP and AP were used to predict performances of lines from the identical validation set in CV1 and CV2, respectively.
Nearly identical validation rates of 85.1% and 84.9% were observed when considering only the SNPs detected with higher stringency criteria of PSNP ≥ 0.95 or ≥ 0.99.
Overall accuracies between various models were compared with a pairwise t-test (α = 0.05) based on identical validation sets within each NAM population.
Similar(57)
Proteins in a set of high-performing models that have an identical cross-validation performance were ranked according to their frequency among models.
A second cohort of eight-week-old C57/B6J male mice (n = 5) was processed in an identical manner for validation using bisulfite pyrosequencing.
Identical training and validation data populations were analyzed by each model for all 20 bootstrap samples to ensure fair comparisons across analytical models.
What will validation validate?
If k equals the number of training set objects, then k fold cross-validation is identical to leave-one-out cross-validation (LOO-CV).
The performance of PSI-BLAST was evaluated using jackknife cross validation method (identical to jackknife CV test used for the evaluation of SVM models), where each sequence in the training dataset was used as a BLAST query sequence and remaining sequences were used as BLAST database.
Of the 12 individuals six had identical genotypes following variant validation.
Still, of the 12 duplicates only six had identical genotypes following variant validation.
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