Sentence examples for identical alignment from inspiring English sources

For example, SSAHA2 aligns read SRR003161.1261578 to X chromosome with mapping quality 244 and BWA-SW aligns it to chromosome 2 with identical alignment length and edit distance.

A deep scoring matrix produces a less identical alignment because it accepts more amino acid replacements.

The comparison between MethylExtract and Bis-SNP needs to be based on identical alignment input files in BAM/SAM format.

After PCR amplification and sequencing of DNA from selected regions of the COI gene and ribosomal ITS region, we found identical alignment of sequences from Ao38 cells and High Five (T. ni) cells, and nearly identical alignment with sequences from T. ni larvae, as well as with T. ni sequences in the BOLD database [ 3, 4].

We also found two unique DLPs (named navitricin-1 and -2) in the N. vitripennis genome, which possess 8 cysteines with an identical alignment pattern to the family III members of fungal DLPs [ 32].

Second, some reads may have nearly identical alignment to locations in the gene and pseudogene, and their mapping is often determined by the location with the least error in alignment.

Sequence read alignment performed with an alternative aligner, Bowtie, yielded identical alignments for the large majority of reads and indistinguishable results in all downstream analyses.

'Deeper' scoring matrices (scoring matrices targeted to more evolutionary change) produce longer less identical alignments by chance, whereas 'shallower' scoring matrices produce shorter higher identity alignments (Fig. 3).

This is not true for bit-scores, which are very close for identical alignments.

The program uses exact matching, clustering, and alignment extension strategies to create a dot plot based on the number of identical alignments between two genomes.

The program uses exact matching, clustering, and alignment extension strategies to create a dot plot based on the number of identical alignments between genomes.