Sentence examples for human identifiers from inspiring English sources

We identified the human orthologs of those bovine DEGs and only considered the human identifiers for the subsequent analyses, since more comprehensive knowledge is available about the human factors regarding their functions and regulatory relationships.

All mature, canonical miRNAs which were orthologs to human miRNAs (input data with human identifiers) were used for analysis.

Therefore, for biological processes and target prediction analysis 61 DE miRNAs with human identifiers were used in Ingenuity Pathway Analysis (IPA).

Identical miRBase gene names across species indicate orthologs, therefore in order to upload our data to IPA human identifiers for all miRNAs were used.

Over 4,000 probesets were selected from microarray data using the J5 metric, annotated and converted to human identifiers using public-access tools including DAVID, and assigned to pathways with the GeneGo MetaCore program.

Thus, we assumed that most of the abstracts belonged to human and resolved the identified miRNA entities to human identifier in miRBase.

For simplicity, we referred to proteins by their human identifier (Uniprot identification ending with "HUMAN").

CEGMA was built considering conserved genes in six organisms: Homo sapiens, Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Saccharomyces cerevisiae and Schizosaccharomyces pombe, 449 of which have an Ensembl human identifier.

(Additional information including cDNA identifier, ensembl human gene identifier, OMIM identifier and disease name can be found in Additional file 3, Table S3).

With the confidence scoring scheme disabled, SciMiner identified 1114 human gene identifiers of which 677 matched the gold standard set.

We used g:Orth from the g:Profiler toolset to perform ortholog conversions between mouse and human database identifiers and g Convert from the same toolset to translate identifiers used in one experiment to our common Ensembl identifier [26].