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For each protein, we obtained about the same 400 sequences that would give also partial hits to different species, which suggested a potential existence of different domains in the protein.
We generated a.gff file to map hits to different regions in the genomes of our database.
A : Distribution of best hits to different taxa for three groups of B. massiliensis proteins.
Unique hits denotes the number of unique hits to different genes.
Theoretically, the genes with significant hits to different genomic regions (e.g., different genome contigs) should represent duplicated genes.
In a few cases, two ORFs from a single conseq had significant hits to different D. melanogaster gene.
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If two sequences are orthologous paralogs, during the Blast search, they probably will hit to different genes in the Swissprot database.
Thinking that the disease may result from a combination of "hits" to several different genes, Accili and his colleagues attempted to recreate diabetes symptoms by breeding mice lacking half their copies of two genes.
Among the 6159 annotated sequences, 5975 had significant hits to three different databases.
BLASTX analyses identified 29 medfly sequences with significant hits to 12 different Drosophila OBP genes (Table 3).
When the top hits to the different groups are plotted, the matches outside the Firmicutes are scattered along the Fusobacterium chromosome and, in many cases, they are clustered.
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CEO of Professional Science Editing for Scientists @ prosciediting.com