Because no sequences showed highly similarity with these introns, it is currently unclear where they originated.
Although intron gain/loss was also found in some species, the structure of these AEE genes showed highly similarity, illustrating that the main characteristics of the gene structure of this family were formed in the common ancestor of land plants.
Amino acid analysis indicated that POSWOI is homologous to other fungal swollenins, and shows highly similarity (>99%) to the Penicillium decumbens swollenin, whose biochemical characteristics have not yet been reported.
We blasted Trinity-produced data against mouse transcripts and manually checked all highly similar (similarity >= 97%) sequences to ensure absence of contamination.
The amino acid sequence of OsCYP-25 is highly similar (similarity score 71.51%) to OsCYP2 and other cyclophilins of various plant species where seven residues (His-61, Arg-62, Phe-67, Gln-118, Phe-120, Trp-128 and His-33) associated with PPIase catalysis, of which three of these namely His-61, Arg-62 and Phe-120, are found to be extremely important for PPIase activity.
The 1H and 13C NMR spectra of 2 (Tables 1, 2) showed highly similarities to those of 1, indicating that these two compounds possessed identical carbon scaffold and substitution patterns.
The results (Table 3) showed that samples from same mountain were highly similar, their similarity value all more than 0.7523, indicating a stable aroma characteristic for samples from the same mountain.
In the dataset of real duplicates, the frequency of highly similar sections (similarity ratio >0.5) is the highest within the result sections (0.94), the second highest within methods sections, (0.89) and the lowest within introduction sections (0.82).
Plasmid DNA restriction fragment length polymorphism showed that band patterns of the 2 KPC-3 encoding KPC-3 encodingn1 and Eco2 were highly similar (98% similarity), and Southern analysis with a blaKplasmidsbe shofed the same hybridization pattern.
The predicted peptide sequence is identical with GenBank ADY15304.1, defined as R2R3-MYB transcription factor from P. avium, and highly similar (85% similarity) with PavMYB10, another previously identified R2R3 MYB factor sequence from sweet cherry.
Discrepancies between individual ESTs were resolved to maximize sequence similarity to highly similar homologs.
