KLEIO then returns a set of articles relevant to the query in XML containing PubMed IDs and the abstract highlighted with the terms matching the query.
By clicking the link to "co-occurrence times", it prompts the co-occurred abstracts and the highlighted interaction extraction in the abstracts (Step 5).
Saxaglyptin is highlighted (yellow) from the abstract text for PMID 22651127 (Preclinical development of dipeptidyl peptidase IV inhibitor alogliptin).
The abstract contains highlighted genes, chemicals and diseases within the text, each of which is hyperlinked back to the CTD web interface.
The title and the abstract contain highlighted genes and chemicals within the text, as well as lists of each beneath the abstract; the lists hyperlink each text-mined actor back to the CTD web interface.
This process consisted mainly of finding the highlighted interaction in the abstract tagged by PESCADOR, confirming its involvement in the preimplantation development by checking the corresponding paper and drawing this interaction in the pathway picture.
The list of abstracts is downloaded to the Dashboard and can be filtered using up to 3 additional query terms that are highlighted, in color, on the abstract.
Moreover, what technology interest Charischak could identify was hardly in new technologies: It was predominantly the use of handheld calculators and Computer Algebra Systems (like Mathematica), which where highlighted in the title or abstract of just 15 sessions.
Her imagery, often highlighted with gold leaf, is abstract and gestural but refers to Renaissance-era subjects: aristocratic or religious portraits, a rendering of St. Mark's Basilica in Venice, Italy.
One of the more interesting features of the 'Annotation' panel is that check boxes are displayed next to each interaction and concept; clicking these check boxes will cause the associated text-mined data to be highlighted and hyperlinked within the abstract text or alternatively, simply plain text.
Initially two annotators highlighted relevant parts in 10 abstracts and discussed the annotations.
