Sentence examples for highest read depth from inspiring English sources

We then analyzed InterPro domains contained in the 100 most duplicated genes (genes embedded in regions with the highest read depth values) (Additional file 15).

(i) We selected a position with the highest read depth as the starting point.

Interestingly, at a MAF of 100% the FDR is zero for lowest read depth and over 0.9 for the highest read depth.

The highest read depth (193 reads, corresponding to about 25,000 copies/1C) was found for a 1,213 bp contig CL1Contig751 representing the LTR sequence of a novel Ty1/copia element designated Ps-copia-1/751 Ps-copia-1/751 Ps-copia-1/751

Mapping reads from the Illumina paired-end run to the assembly gave a range of read depths that support variation in copy number of loci across the mitochondrial genome, the highest read depth was approximately three fold higher than the lowest depth (see Additional file 3).

VARW specific errors increased in frequency with higher read depth in the BRCA datasets, suggesting that homopolymer-associated indel errors cannot be reduced by increasing the depth of coverage.

Moreover, we required the minor allele at each SNP be represented in at least three reads and that the total number of reads per SNP was lower than 120 (SNPs with higher read depth were discarded).

Second type of ITS sequence obtained after Sanger sequencing (putative pseudogene; Table S2) was not found in the 454 dataset despite the relatively high read depth of the ITS-454 data (RD = 149.6; Figure 2).

Other exception was M. textilis (ITC 0539), in which one sequence type of ITS obtained after Sanger sequencing was not found in the 454 dataset despite the relatively high read depth.

Therefore exome capture provides high read depth sequence for at least 250 bp surrounding bait regions.

With new technologies promising ever higher read depth, we examined its effect on measurement precision.