Exact(31)
The aligned genomic sequences from these genomes showing highest alignment qualities (high percentage of sequence similarity over a significant stretch) were selected and used as templates in further Blast search of expressed EST sequences (dbEST) and cDNA sequences (nr database from NCBI) for best matches of cDNA sequences in different species.
Of the surviving reads, ~60 % aligned to the reference genome (Microcystis aeruginosa NIES-843) with the highest alignment rates occurring on day 2 (87 %; Additional file 1: Table S1).
3) Retain the region of overlap in the HSP alignment with the highest alignment score, and remove the region of overlap from both the un-aligned nucleotide and aligned protein sequence of the lower scoring HSP. 4) Remove one or two additional nucleotides past the region of overlap in the un-aligned nucleotide sequence for the lower-scoring HSP if the frameshift is +1 or +2, respectively.
By comparison, we can find that the alignment density of individualized SWCNTs on sample B is much higher than that on sample A, so heating enhanced the DEP process on sample B. The intuitive comparison with the highest alignment density currently reported in references [3] and [4] shows that the alignment density of SWCNTs on sample B is also much higher.
Only the sequence region of the Bcl-xL structure that contained the pore-forming domain and yielded the highest alignment score was used for the multiple sequence alignment.
The median was calculated based upon the sequences showing the highest alignment scores (see Methods section).
Similar(29)
Results: Compared with other aligners, Slider has higher alignment accuracy and efficiency.
The ORFs aligned against ORFs with high alignment lengths (match length of at least 50 amino acid) and high identities (≥60%) were listed as potential paralogous ORFs.
The alignment was cropped to only include sites with high alignment quality resulting in only 155 158 bp that aligned unambiguously between species.
We utilized an aligned SOI wafer bonding method that allows very high alignment accuracy to achieve very dense 3D interconnections.
We know from surveys that we have high staff engagement and high alignment with our mission, but we need to do more to connect the different parts of our organisation.
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